Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887772.1_cds_XP_016442265.1_37546
CDS Infomation

[gene=LOC107767695] [db_xref=GeneID:107767695] [protein=probable galacturonosyltransferase 13 isoform X2] [protein_id=XP_016442265.1] [location=join(19713..19935,21669..21724,21886..22041,22307..22897,23967..24269,28239..28520)] [gbkey=CDS]
Sequence

ATGCAGCTGCACTTCTCACCTAGCATGAGAAGTATTACAATATCGAATAGTAATGGAGGA
GGTGTAGGTGGTGGTGATTTGATGAAGATCAAAGTCGCAGCTCGCCAATTCTCTTATCGA
ACGCTCTTTCACACCATATTAATCCTAGCTTTCTTGTTGCCTTTTGTCTTCATTCTCACT
GCTCTTGTTACTCTTGAAGGTGTCAACAAGTGCTCCTCATTTGATTGTTTAGGCAGAAGA
TTGGGACCAAAGCTCCTTGGTCGATCTGATGGTTCAGGGAAGCTTGTTAAGGATTTTGTT
AAGATCCTCAATCAAGTGAACTCGGAGGAAGTGCCAGCTGGCTTGAAGCTCCCAGAGTCA
TATAGTCAACTGGTTTCTGAAATAAAAAACAACAAGTACAGCGCAAAAGAATTTGCTTTG
ATGCTGAAGGGAATGATGGAGAGATCTGAAAGGGAGATCAGAGAATCAAAATTTGCAGAG
TTGATGAATAAACACTTTGCTGCAAGTGCTGTTCCAAAAGGCATTCACTGCCTTTCTCTG
CGGTTGACTGATGAATACTCAACCAATGCTCATGCACGCAAACAGTTGCCTTCACCAGAA
CTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCGACTGATAACATC
CTAGCTGCGTCAGTTGTCGTCAATTCTGGCGTGCAGTCATCTCTAAAGCCTGAAAAAATT
GTTTTCCACGTTATCACTGATAAAAAAACATATGCAGGCATGCATTCATGGTTTGCTCTG
AATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTGTTCATCAGTTTGACTGGTTGACA
AGAGAAAACGTTCCAGTGCTTGAAGTAGTTGAGAGCCATTATGGGATTCGGAAATACTAC
CATGGAAATCATGTTGCAGGTGCCAATCTCAGTGATATTACTCCGCGATCTTTTGCCTCA
AAATTGCAGGCTAGAAGTCCGAAATACATATCCTTGCTAAATCATCTCCGCATATATTTG
CCAGAGCTCTTCCCAAATCTGGACAAGGTGGTTTTCTTGGATGATGATGTCGTAATTCAA
CGTGACCTATCTCCATTGTGGGAAATTGACCTGAATGGAAAGGTGAATGGAGCTGTTGAG
ACCTGTAAAGGTGAAGATAAGTGGGTGATGTCCAAGCGATTCAGAAACTACTTCAATTTT
TCTCATCATCTCATAGCAAAGAATTTGAACCCCGACGAGTGTGCATGGGCTTATGGGATG
AATATCTTTGACTTGCGTGCATGGAGAAAGACAAGTGTAAGAGATACTTATCATACATGG
CTTAAAGAGAATCTGAAGTCAAACTTGACAATGTGGAAACTTGGAACACTGCCTCCTGCT
TTGATTGCATTCAAGGGTCATGTTTATCCAATTGACCCCTCGTGGCACATGCTTGGCTTG
GGCTATCAGAATAAGACCAACATTGAGAATGTGAAGAAGGCTGCTGTAATTCATTACAAT
GGCCAATCCAAGCCTTGGCTAGACATAGGCTTTGAGCATCTCCGCCCTTTTTGGACCAAG
TATGTTAACTGCTCCAATGATTTTATTAGGAGTTGCCACATATTGGAGTAG

Peptide Sequence

PEP ID

XP_016442265.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 13 isoform X2 [Nicotiana tabacum]
Sequence

MQLHFSPSMRSITISNSNGGGVGGGDLMKIKVAARQFSYRTLFHTILILAFLLPFVFILT
ALVTLEGVNKCSSFDCLGRRLGPKLLGRSDGSGKLVKDFVKILNQVNSEEVPAGLKLPES
YSQLVSEIKNNKYSAKEFALMLKGMMERSEREIRESKFAELMNKHFAASAVPKGIHCLSL
RLTDEYSTNAHARKQLPSPELLPLLSDNSLHHFVLSTDNILAASVVVNSGVQSSLKPEKI
VFHVITDKKTYAGMHSWFALNPVSPAIVEVKGVHQFDWLTRENVPVLEVVESHYGIRKYY
HGNHVAGANLSDITPRSFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQ
RDLSPLWEIDLNGKVNGAVETCKGEDKWVMSKRFRNYFNFSHHLIAKNLNPDECAWAYGM
NIFDLRAWRKTSVRDTYHTWLKENLKSNLTMWKLGTLPPALIAFKGHVYPIDPSWHMLGL
GYQNKTNIENVKKAAVIHYNGQSKPWLDIGFEHLRPFWTKYVNCSNDFIRSCHILE

Transcript Sequence

Gene sequence data has not been registered.